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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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Y
A
AbortOnError (class in gc3libs.workflow)
add() (gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.session.Session method)
(gc3libs.workflow.DependentTaskCollection method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.SequentialTaskCollection method)
(gc3libs.workflow.TaskCollection method)
add_params() (gc3libs.authentication.Auth method)
add_vm() (gc3libs.backends.vmpool.VMPool method)
adjoin() (gc3libs.url.Url method)
ANY_OUTPUT (in module gc3libs)
API
append() (gc3libs.utils.History method)
Application (class in gc3libs)
application_name (gc3libs.Application attribute)
ApplicationDescriptionError
AppPotApplication (class in gc3libs.application.apppot)
at_most_once_per_cycle() (gc3libs.core.BgEngine static method)
attach() (gc3libs.Task method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.SequentialTaskCollection method)
(gc3libs.workflow.TaskCollection method)
Auth (class in gc3libs.authentication)
auth_factory (gc3libs.config.Configuration attribute)
authenticated() (gc3libs.backends.LRMS static method)
AuthError
aux_files() (gc3libs.application.codeml.CodemlApplication static method)
AuxiliaryCommandError
B
backup() (in module gc3libs.utils)
basename_sans() (in module gc3libs.utils)
BatchSystem (class in gc3libs.backends.batch)
BgEngine (class in gc3libs.core)
bsub() (gc3libs.Application method)
C
cache_for() (in module gc3libs.utils)
cancel_job() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
cat() (in module gc3libs.utils)
changed (gc3libs.workflow.RetryableTask attribute)
(gc3libs.workflow.TaskCollection attribute)
check_file_access() (in module gc3libs.utils)
ChunkedParameterSweep (class in gc3libs.workflow)
close() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
cmdline() (gc3libs.Application method)
CodemlApplication (class in gc3libs.application.codeml)
Command-line
Command-line option
compatible_resources() (gc3libs.Application method)
compute_nr_of_slots() (in module gc3libs.backends.sge)
ComputeTargetVals (class in gc3libs.optimizer.drivers)
CONFIG_FILE_LOCATIONS (in module gc3libs.defaults)
Configuration (class in gc3libs.config)
ConfigurationError
ConfigurationFileError
configure_logger() (in module gc3libs)
construct_from_cfg_dict() (gc3libs.config.Configuration method)
copy() (gc3libs.utils.Struct method)
CopyError
Core
(class in gc3libs.core)
count_jobs() (in module gc3libs.backends.pbs)
(in module gc3libs.backends.sge)
(in module gc3libs.backends.slurm)
count_running_tasks() (gc3libs.backends.shellcmd.ShellcmdLrms method)
count_used_cores() (gc3libs.backends.shellcmd.ShellcmdLrms method)
count_used_memory() (gc3libs.backends.shellcmd.ShellcmdLrms method)
counts() (gc3libs.core.BgEngine method)
(gc3libs.core.Engine method)
CPU Time
create_core() (in module gc3libs)
create_engine() (in module gc3libs)
created() (gc3libs.cmdline.SessionBasedDaemon method)
D
DaemonClient (class in gc3libs.cmdline)
DataStagingError
de_opt() (gc3libs.optimizer.drivers.SequentialDriver method)
deleted() (gc3libs.cmdline.SessionBasedDaemon method)
DependentTaskCollection (class in gc3libs.workflow)
deploy_configuration_file() (in module gc3libs.utils)
destroy() (gc3libs.session.Session method)
detach() (gc3libs.Task method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.TaskCollection method)
DetachedFromControllerError
DifferentialEvolutionAlgorithm (class in gc3libs.optimizer.dif_evolution)
dirname() (in module gc3libs.utils)
draw_population() (in module gc3libs.optimizer)
DuplicateEntryError
Duration (class in gc3libs.quantity)
E
Engine (class in gc3libs.core)
Enum (class in gc3libs.utils)
Error
error_ignored() (in module gc3libs)
EvolutionaryAlgorithm (class in gc3libs.optimizer)
evolve() (gc3libs.optimizer.dif_evolution.DifferentialEvolutionAlgorithm method)
(gc3libs.optimizer.EvolutionaryAlgorithm method)
evolve_fn() (gc3libs.optimizer.dif_evolution.DifferentialEvolutionAlgorithm static method)
example_cfg_dict() (in module gc3libs.testing.helpers)
exitcode (gc3libs.Run attribute)
expansions() (gc3libs.template.Template method)
(in module gc3libs.template)
ExponentialBackoff (class in gc3libs.utils)
F
FatalError
fetch_output() (gc3libs.core.BgEngine method)
(gc3libs.Task method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.TaskCollection method)
fetch_output_error() (gc3libs.Application method)
fgrep() (in module gc3libs.utils)
FilePoller (class in gc3libs.poller)
FilesystemStore (class in gc3libs.persistence)
(class in gc3libs.persistence.filesystem)
filter() (gc3libs.core.MatchMaker method)
find_task_by_id() (gc3libs.core.BgEngine method)
(gc3libs.core.Engine method)
first() (in module gc3libs.utils)
flush() (gc3libs.session.Session method)
forget() (gc3libs.session.Session method)
format_arg_value() (in module gc3libs.debug)
format_message() (gc3libs.utils.History method)
free() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.Task method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.TaskCollection method)
from_encoded_bytes() (in module gc3libs.utils)
from_filesystem_bytes() (in module gc3libs.utils)
from_template() (in module gc3libs.utils)
from_terminal_bytes() (in module gc3libs.utils)
G
GamessApplication (class in gc3libs.application.gamess)
GamessAppPotApplication (class in gc3libs.application.gamess)
gc3libs (module)
gc3libs.application (module)
gc3libs.application.apppot (module)
gc3libs.application.codeml (module)
gc3libs.application.demo (module)
gc3libs.application.gamess (module)
gc3libs.application.rosetta (module)
gc3libs.application.turbomole (module)
gc3libs.authentication (module)
gc3libs.authentication.ec2 (module)
gc3libs.authentication.openstack (module)
gc3libs.authentication.ssh (module)
gc3libs.backends (module)
gc3libs.backends.batch (module)
gc3libs.backends.lsf (module)
gc3libs.backends.noop (module)
gc3libs.backends.pbs (module)
gc3libs.backends.sge (module)
gc3libs.backends.shellcmd (module)
gc3libs.backends.slurm (module)
gc3libs.backends.transport (module)
gc3libs.backends.vmpool (module)
gc3libs.cmdline (module)
gc3libs.config (module)
gc3libs.core (module)
gc3libs.debug (module)
gc3libs.defaults (module)
gc3libs.events (module)
gc3libs.exceptions (module)
gc3libs.optimizer (module)
gc3libs.optimizer.dif_evolution (module)
gc3libs.optimizer.drivers (module)
gc3libs.optimizer.extra (module)
gc3libs.persistence (module)
gc3libs.persistence.accessors (module)
gc3libs.persistence.filesystem (module)
gc3libs.persistence.idfactory (module)
gc3libs.persistence.serialization (module)
gc3libs.persistence.sql (module)
gc3libs.persistence.store (module)
gc3libs.poller (module)
gc3libs.quantity (module)
gc3libs.session (module)
gc3libs.template (module)
gc3libs.testing (module)
gc3libs.testing.helpers (module)
gc3libs.url (module)
gc3libs.utils (module)
gc3libs.workflow (module)
gc3utils (module)
gc3utils.frontend (module)
generic_filename_mapping() (in module gc3libs.backends.batch)
GET (in module gc3libs.persistence.accessors)
get() (gc3libs.authentication.Auth method)
get_all_vms() (gc3libs.backends.vmpool.VMPool method)
get_available_physical_memory() (in module gc3libs.utils)
get_backend() (gc3libs.core.BgEngine method)
get_epilogue_script() (gc3libs.backends.batch.BatchSystem method)
get_jobid_from_submit_output() (gc3libs.backends.batch.BatchSystem method)
get_linux_memcg_limit() (in module gc3libs.utils)
get_max_real_memory() (in module gc3libs.utils)
get_new_events() (gc3libs.poller.FilePoller method)
(gc3libs.poller.INotifyPoller method)
(gc3libs.poller.Poller method)
(gc3libs.poller.SwiftPoller method)
get_num_processors() (in module gc3libs.utils)
get_prologue_script() (gc3libs.backends.batch.BatchSystem method)
get_resource_status() (gc3libs.backends.LRMS method)
(gc3libs.backends.lsf.LsfLrms method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.pbs.PbsLrms method)
(gc3libs.backends.sge.SgeLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
(gc3libs.backends.slurm.SlurmLrms method)
get_resources() (gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
get_results() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
get_scheduler_and_lock_factory() (in module gc3libs.utils)
get_vm() (gc3libs.backends.vmpool.VMPool method)
getattr_nested() (in module gc3libs.utils)
GetAttributeValue (class in gc3libs.persistence.accessors)
GetItemValue (class in gc3libs.persistence.accessors)
GetOnly (class in gc3libs.persistence.accessors)
GetValue (class in gc3libs.persistence.accessors)
grep() (in module gc3libs.utils)
H
has_converged() (gc3libs.optimizer.EvolutionaryAlgorithm method)
has_running_tasks() (gc3libs.backends.shellcmd.ShellcmdLrms method)
hello() (gc3libs.cmdline.SessionBasedDaemon.Server method)
help() (gc3libs.cmdline.SessionBasedDaemon method)
History (class in gc3libs.utils)
I
Id (class in gc3libs.persistence.idfactory)
IdFactory (class in gc3libs.persistence)
(class in gc3libs.persistence.idfactory)
ifelse() (in module gc3libs.utils)
in_state() (gc3libs.Run method)
init_counts_for() (gc3libs.core.Engine method)
INotifyPoller (class in gc3libs.poller)
InputFileError
InstanceNotFound
InternalError
IntId (class in gc3libs.persistence.sql)
InvalidArgument
invalidate_cache() (gc3libs.persistence.filesystem.FilesystemStore method)
(gc3libs.persistence.FilesystemStore method)
(gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
InvalidOperation
InvalidResourceName
InvalidType
InvalidUsage
InvalidValue
irange() (in module gc3libs.utils)
is_class_private_name() (in module gc3libs.debug)
is_classmethod() (in module gc3libs.debug)
iter_tasks() (gc3libs.core.BgEngine method)
(gc3libs.core.Engine method)
(gc3libs.workflow.TaskCollection method)
iter_workflow() (gc3libs.session.Session method)
(gc3libs.workflow.TaskCollection method)
J
Job
JobIdFactory (class in gc3libs.persistence)
(class in gc3libs.persistence.idfactory)
JOBS_DIR (in module gc3libs.defaults)
K
keys() (gc3libs.utils.Struct method)
kill() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
(gc3libs.Task method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.SequentialTaskCollection method)
(gc3libs.workflow.TaskCollection method)
L
last() (gc3libs.utils.History method)
list() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
(gc3libs.persistence.FilesystemStore method)
(gc3libs.persistence.filesystem.FilesystemStore method)
(gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
list_details() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
list_ids() (gc3libs.session.Session method)
list_names() (gc3libs.session.Session method)
load() (gc3libs.backends.vmpool.VMPool method)
(gc3libs.config.Configuration method)
(gc3libs.persistence.FilesystemStore method)
(gc3libs.persistence.filesystem.FilesystemStore method)
(gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
(gc3libs.session.Session method)
load_many() (gc3libs.session.Session method)
LoadError
lock() (in module gc3libs.utils)
log_stats() (in module gc3libs.optimizer.extra)
lookup() (in module gc3libs.utils)
LRMS (class in gc3libs.backends)
LRMSError
LRMSSkipSubmissionToNextIteration
LRMSSubmitError
LSF_CACHE_TIME (in module gc3libs.defaults)
LsfLrms (class in gc3libs.backends.lsf)
M
main() (in module gc3utils.frontend)
make_auth() (gc3libs.config.Configuration method)
make_filesystemstore() (in module gc3libs.persistence.filesystem)
make_poller() (in module gc3libs.poller)
make_resources() (gc3libs.config.Configuration method)
make_sqlstore() (in module gc3libs.persistence.sql)
make_store() (in module gc3libs.persistence)
(in module gc3libs.persistence.store)
manage() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
MatchMaker (class in gc3libs.core)
MaximumCapacityReached
Memory (class in gc3libs.quantity)
merge_file() (gc3libs.config.Configuration method)
method_name() (in module gc3libs.debug)
mkdir() (in module gc3libs.utils)
mkdir_with_backup() (in module gc3libs.utils)
modified() (gc3libs.cmdline.SessionBasedDaemon method)
move_recursively() (in module gc3libs.utils)
movefile() (in module gc3libs.utils)
MOVER_SCRIPT (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
movetree() (in module gc3libs.utils)
N
name() (in module gc3libs.debug)
NeverUsedException
new() (gc3libs.persistence.IdFactory method)
(gc3libs.Task method)
(gc3libs.persistence.idfactory.IdFactory method)
new_task() (gc3libs.workflow.ChunkedParameterSweep method)
new_tasks() (gc3libs.cmdline.SessionBasedScript method)
next() (gc3libs.optimizer.drivers.ParallelDriver method)
(gc3libs.workflow.SequentialTaskCollection method)
(gc3libs.workflow.StagedTaskCollection method)
NoAccessibleConfigurationFile
NoConfigurationFile
NoneAuth (class in gc3libs.authentication)
nonnegative_int() (in module gc3libs.cmdline)
NoOpLrms (class in gc3libs.backends.noop)
NoResources
NoValidConfigurationFile
O
occurs() (in module gc3libs.utils)
ONLY() (gc3libs.persistence.accessors.GetValue method)
OutputNotAvailableError
P
ParallelDriver (class in gc3libs.optimizer.drivers)
ParallelTaskCollection (class in gc3libs.workflow)
parse_args() (gc3libs.cmdline.SessionBasedDaemon method)
parse_linux_proc_limits() (in module gc3libs.utils)
parse_qhost_f() (in module gc3libs.backends.sge)
parse_qstat_f() (in module gc3libs.backends.sge)
parse_range() (in module gc3libs.utils)
PbsLrms (class in gc3libs.backends.pbs)
peek() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.Task method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.TaskCollection method)
Persistable (class in gc3libs.persistence)
(class in gc3libs.persistence.serialization)
Persistent
plot_population (class in gc3libs.optimizer.extra)
PlusInfinity (class in gc3libs.utils)
Poller (class in gc3libs.poller)
populate() (in module gc3libs.optimizer)
positive_int() (in module gc3libs.cmdline)
post_fork() (gc3libs.persistence.store.Store method)
pre_fork() (gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
pre_run() (gc3libs.cmdline.DaemonClient method)
(gc3libs.cmdline.SessionBasedScript method)
prettyprint() (in module gc3libs.utils)
print_stats() (in module gc3libs.optimizer.extra)
print_summary_table() (gc3libs.cmdline.SessionBasedScript method)
print_tasks_table() (gc3libs.cmdline.SessionBasedScript method)
PRIVATE_DIR (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
progress() (gc3libs.core.BgEngine method)
(gc3libs.Task method)
(gc3libs.core.Engine method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.SequentialTaskCollection method)
progressive_number() (in module gc3libs.utils)
Python Enhancement Proposals
PEP 8
Q
qsub_pbs() (gc3libs.Application method)
qsub_sge() (gc3libs.Application method)
Quantity (class in gc3libs.quantity)
R
random() (in module gc3libs.backends.noop)
rank() (gc3libs.core.MatchMaker method)
rank_resources() (gc3libs.Application method)
RCDIR (in module gc3libs.defaults)
read_contents() (in module gc3libs.utils)
RecoverableAuthError
RecoverableDataStagingError
RecoverableError
RecoverableTransportError
recurse (gc3libs.poller.FilePoller attribute)
(gc3libs.poller.INotifyPoller attribute)
redo() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
(gc3libs.Task method)
(gc3libs.core.Engine method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.SequentialTaskCollection method)
register() (in module gc3libs.persistence.store)
remove() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.persistence.FilesystemStore method)
(gc3libs.persistence.filesystem.FilesystemStore method)
(gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
(gc3libs.session.Session method)
(gc3libs.workflow.TaskCollection method)
(in module gc3libs.utils)
remove_vm() (gc3libs.backends.vmpool.VMPool method)
replace() (gc3libs.persistence.filesystem.FilesystemStore method)
(gc3libs.persistence.FilesystemStore method)
(gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
reserve() (gc3libs.persistence.IdFactory method)
(gc3libs.persistence.idfactory.IdFactory method)
Resource
RESOURCE_DIR (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
ResourceNotReady
resources (gc3libs.core.Engine attribute)
retry() (gc3libs.workflow.RetryableTask method)
RetryableTask (class in gc3libs.workflow)
returncode (gc3libs.Run attribute)
RosettaApplication (class in gc3libs.application.rosetta)
RosettaDockingApplication (class in gc3libs.application.rosetta)
Run (class in gc3libs)
Run.Arch (class in gc3libs)
running() (gc3libs.Task method)
S
safe_repr() (in module gc3libs.utils)
same_docstring_as() (in module gc3libs.utils)
samefile() (in module gc3libs.utils)
save() (gc3libs.backends.vmpool.VMPool method)
(gc3libs.persistence.FilesystemStore method)
(gc3libs.persistence.filesystem.FilesystemStore method)
(gc3libs.persistence.sql.SqlStore method)
(gc3libs.persistence.store.Store method)
(gc3libs.session.Session method)
save_all() (gc3libs.session.Session method)
sbatch() (gc3libs.Application method)
Scheduler (class in gc3libs.core)
scheduler (class in gc3libs.core)
select() (gc3libs.optimizer.dif_evolution.DifferentialEvolutionAlgorithm method)
(gc3libs.optimizer.EvolutionaryAlgorithm method)
select_resource() (gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
SequentialDriver (class in gc3libs.optimizer.drivers)
SequentialTaskCollection (class in gc3libs.workflow)
Session
(class in gc3libs.session)
SessionBasedDaemon (class in gc3libs.cmdline)
SessionBasedDaemon.Commands (class in gc3libs.cmdline)
SessionBasedDaemon.Server (class in gc3libs.cmdline)
SessionBasedScript (class in gc3libs.cmdline)
set_end_timestamp() (gc3libs.session.Session method)
set_start_timestamp() (gc3libs.session.Session method)
setup() (gc3libs.cmdline.SessionBasedDaemon method)
(gc3libs.cmdline.SessionBasedScript method)
setup_args() (gc3libs.cmdline.DaemonClient method)
(gc3libs.cmdline.SessionBasedDaemon method)
(gc3libs.cmdline.SessionBasedScript method)
setup_options() (gc3libs.cmdline.DaemonClient method)
(gc3libs.cmdline.SessionBasedDaemon method)
SgeLrms (class in gc3libs.backends.sge)
sh_quote_safe() (in module gc3libs.utils)
sh_quote_safe_cmdline() (in module gc3libs.utils)
sh_quote_unsafe() (in module gc3libs.utils)
sh_quote_unsafe_cmdline() (in module gc3libs.utils)
ShellcmdLrms (class in gc3libs.backends.shellcmd)
shellexit_to_returncode() (gc3libs.Run static method)
show() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
shutdown() (gc3libs.cmdline.SessionBasedDaemon method)
signal (gc3libs.Run attribute)
SimpleParallelTaskCollection (class in gc3libs.testing.helpers)
SimpleSequentialTaskCollection (class in gc3libs.testing.helpers)
SlurmLrms (class in gc3libs.backends.slurm)
SPOOLDIR (in module gc3libs.defaults)
SpoolDirError
SqlStore (class in gc3libs.persistence.sql)
Square (class in gc3libs.application.demo)
stage() (gc3libs.workflow.SequentialTaskCollection method)
StagedTaskCollection (class in gc3libs.workflow)
start() (gc3libs.cmdline.SessionBasedDaemon.Server method)
(gc3libs.core.BgEngine method)
State
state (gc3libs.Run attribute)
stats() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Engine method)
(gc3libs.workflow.TaskCollection method)
STDERR
STDOUT
stop() (gc3libs.cmdline.SessionBasedDaemon.Server method)
(gc3libs.core.BgEngine method)
StopOnError (class in gc3libs.workflow)
stopped() (gc3libs.Task method)
Store (class in gc3libs.persistence.store)
string_to_boolean() (in module gc3libs.utils)
Struct (class in gc3libs.utils)
submit() (gc3libs.core.BgEngine method)
(gc3libs.Task method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
(gc3libs.workflow.DependentTaskCollection method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.SequentialTaskCollection method)
(gc3libs.workflow.TaskCollection method)
submit_error() (gc3libs.Application method)
submit_job() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
submitted() (gc3libs.Task method)
substitute() (gc3libs.template.Template method)
SuccessfulApp (class in gc3libs.testing.helpers)
SwiftPoller (class in gc3libs.poller)
T
t_store (gc3libs.persistence.sql.SqlStore attribute)
Task (class in gc3libs)
TaskCollection (class in gc3libs.workflow)
TaskError
tempdir() (in module gc3libs.utils)
Template (class in gc3libs.template)
temporary_config() (in module gc3libs.testing.helpers)
temporary_config_file() (in module gc3libs.testing.helpers)
TemporarySession (class in gc3libs.session)
terminate() (gc3libs.cmdline.SessionBasedDaemon method)
terminated() (gc3libs.application.codeml.CodemlApplication method)
(gc3libs.Task method)
(gc3libs.application.gamess.GamessApplication method)
(gc3libs.application.rosetta.RosettaApplication method)
(gc3libs.application.turbomole.TurbomoleApplication method)
(gc3libs.application.turbomole.TurbomoleDefineApplication method)
(gc3libs.testing.helpers.SuccessfulApp method)
(gc3libs.testing.helpers.UnsuccessfulApp method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.TaskCollection method)
terminating() (gc3libs.Task method)
test_resource() (in module gc3libs.testing.helpers)
TIMEFMT (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
TIMEFMT_CONV (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
to_bytes() (in module gc3libs.utils)
to_str() (in module gc3libs.utils)
to_timedelta() (gc3libs.quantity.Duration method)
touch() (in module gc3libs.utils)
trace() (in module gc3libs.debug)
trace_class() (in module gc3libs.debug)
trace_instancemethod() (in module gc3libs.debug)
trace_module() (in module gc3libs.debug)
TransportError
trigger_after_progress() (gc3libs.core.BgEngine method)
trigger_before_progress() (gc3libs.core.BgEngine method)
TurbomoleApplication (class in gc3libs.application.turbomole)
TurbomoleDefineApplication (class in gc3libs.application.turbomole)
U
UnexpectedJobState
UnexpectedStateError
unknown() (gc3libs.Task method)
UnknownJob
UnknownJobState
unlock() (in module gc3libs.utils)
unmanage() (gc3libs.cmdline.SessionBasedDaemon.Commands method)
UnrecoverableAuthError
UnrecoverableDataStagingError
UnrecoverableError
UnrecoverableTransportError
UnsuccessfulApp (class in gc3libs.testing.helpers)
update() (gc3libs.backends.vmpool.VMPool method)
update_job_state() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
(gc3libs.core.BgEngine method)
(gc3libs.core.Core method)
(gc3libs.core.Engine method)
update_job_state_error() (gc3libs.Application method)
update_opt_state() (gc3libs.optimizer.EvolutionaryAlgorithm method)
update_parameter_in_file() (in module gc3libs.utils)
update_resources() (gc3libs.core.Core method)
update_state() (gc3libs.Task method)
(gc3libs.workflow.ChunkedParameterSweep method)
(gc3libs.workflow.ParallelTaskCollection method)
(gc3libs.workflow.RetryableTask method)
(gc3libs.workflow.SequentialTaskCollection method)
(gc3libs.workflow.TaskCollection method)
Url (class in gc3libs.url)
UrlKeyDict (class in gc3libs.url)
UrlValueDict (class in gc3libs.url)
V
validate_data() (gc3libs.backends.batch.BatchSystem method)
(gc3libs.backends.LRMS method)
(gc3libs.backends.noop.NoOpLrms method)
(gc3libs.backends.shellcmd.ShellcmdLrms method)
VM_OS_OVERHEAD (in module gc3libs.defaults)
VMPool (class in gc3libs.backends.vmpool)
W
wait() (gc3libs.Task method)
(gc3libs.utils.ExponentialBackoff method)
Walltime
WindowsError (in module gc3libs.utils)
WRAPPER_OUTPUT_FILENAME (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
WRAPPER_PID (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
WRAPPER_SCRIPT (gc3libs.backends.shellcmd.ShellcmdLrms attribute)
write_contents() (in module gc3libs.utils)
Y
YieldAtNext (class in gc3libs.utils)
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